NAF: FASTA Compression Benchmark

SILVA Database

• Test dataset: SILVA 16S rRNA database (SILVA_123_SSURef_Nr99_tax_silva.fasta), with U changed to T.
  • Size: 947,966,398 bytes
  • Number of sequences: 597,607
• Method: Benchmark setup

Best setting of each compressor

Ratio vs Speed

Each line connects consecutive settings of one compressor.

Ratio vs Speed (log scale)

Size vs Time (log scale)