NAF
: FASTA Compression Benchmark
Human Genome
Test dataset: The reference human genome GRCh38.p12 (RefSeq accession: GCF_000001405.38).
Size: 3,298,102,737 bytes
Number of sequences: 594
Method:
Benchmark setup
Compared compressors:
FASTA compressors
Best setting of each compressor
Ratio vs Speed
Each line connects consecutive settings of one compressor.
Ratio vs Speed (log scale)
Size vs Time (log scale)